Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKAVVKTNPGYDQMELKDVEEPQVYGDKVKIKVAFTGICGSDIHTFKGEYKNPTTPVTLGHEFSGVVVEVGPDVTSIKVGDRVTSETTFETCGECIYCKEHDYNLCSNRRGIGTQ-------------------------ANGSFAEFVLSREESCHVLDERISLEAAA-LTEPLACCVHSALEKTTIRPDDTVLVFGPGPIGLLLAQVVKAQGA-TVIMAGITKDSDRLRLAKELGMDRIVDTLKED--LAEVVLGMTGGYGAERVFDCSGAVPAVNQGLPLTKKK-GDFVQVGLFAEKKNAIDEESIIQREIAYIGSRSQ---KPSSWILALDLLANGKIDTDKMITKVYGLDDWREAFEAVMAGNEIKVLVKS |
| 1E3I Chain:A ((9-374)) | CKAAIAWKTG-SPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKK-KALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFA-PQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIA--IDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTA-GGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD-EMTIPTVDVI-LGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKSIRTIL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E3I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177104 for 2991 contacts (-59.2/contact) +
2D Compatibility (PS) -35985 + (NN) -13531 + (LL) 308
1D Compatibility (HY) -16800 + (ID) 4100
Total energy: -247212.0 ( -82.65 by residue)
QMean score : 0.502
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