Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKTLVLAEKPSVGKDIGRVLGAKQGKNGYLEGGKYVVTWALGHLVTLADPERYDSKYKNWNMEDLPMLPEKMKLEPIKQTRKQYETVKKLMNRTDITTIVIATDAGREGELVARWIIDYAKIKKPLKRLWISSVTDKAIREGFEHLKPGKAYENLYHSAVARSEADWVVGINATRALTTKYNAQLSCGRVQTPTLAMIQHREEEIRNFKSREYYGITALTEQESFTWNNGQTFDKALAEKLVKSLQGENAVITDVSMKEKKTFSPGLYDLTELQRDANNRYDFSAKETLNIMQTLYERHKV-------LTYPRTDSRFISTDIVPTLKERLVACGVGENAKAARQISVKPIKANKSFVDNSKVSDHHAIIPTEQPVSLGD-LSDKERKIYDLVVKRFLAVLSDPYIYEETSVKAKIGQEEFTLKGKVVKSL--GWKSIYGESREPDQLTKMKKGDTIPVKRINLETGKTKPPARFDEATLLSAMENPSKYMETTNKALAKTLGETGGLGTVATRADIIEKLFNSFSLEKQGKDIQITSKGRQLLELVPEDLKS---PELTARWEQKLSKIAKGELDYRKFTAEMRDYAKKAVTEIKQNDKKFRHDNITSQKCPDCGKPMLKVKGKRGTMLVCQDRECGHRESVSRTTNARCPNCHKRMEMRGEGDKQIFVCVCGHREKLSAFQQRRDKQKNKNVSKTDVAKFMKKQNKQEDEPFNNPMAEALAKLKLDK |
| 2GAI Chain:A ((7-601)) | ---KYIVVESPAKAKTIKSILGNE-----------YEVFASMGHIIDLPKSKFGVDLEKDF----------EPEFAVIKGKEKVVEKLKDLAKKGE---LLIASDMDREGEAIAWHIARVTNTLGRKNRIVFSEITPRVIREAVKN--PREIDMKKVRAQLARRILDRIVGYSLSPVLWRNFKSNLSAGRVQSATLKLVCDREREILRFVPKKYHRITVNFDGLTAEID-VKEKKFFDAETLKEIQSIDELVVEEKKVSVKKFAPPEPFKTSTLQQEAYSKLGFSVSKTMMIAQQLYEGVETKDGHIAFITYMRTDSTRVSDYAKEEARNLITEV-FGEEYVGAHE-AIRPTNVFMT------------------PEEAGKYLNSDQKKLYELIWKRFLASQMKPSQYEETRFVLRTKDGKYRFKGTVLKKIFDGYEKVWKTERNTG-EFPFEEGESVKPVVVKIEEQETKPKPRYTEGSLVKEMERL-------------------GIGRPSTYASTIKLLLNRGYIKKIRGYLYPTIVGSVVMDYLEKKYSDVVSVSFTAEMEKDLDEVEQGKKTDKIVLREFYESFSSVFDRNDRIVV-----DFPTNQKCSCGKEMRLSFGKYGFYLKC---ECGKTRSVKNDEIAVID------------DGKIFL----------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GAI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75269 for 4607 contacts (-16.3/contact) +
2D Compatibility (PS) -60391 + (NN) -14582 + (LL) 8364
1D Compatibility (HY) -26400 + (ID) 7550
Total energy: -175828.0 ( -38.17 by residue)
QMean score : 0.435
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