Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTLEKRFNKYLDRIEVSLIRQFDQSISDIPGMVKLTLGEPDFTTPDHVKEAAKSAIDAN-QSYYTGMSGLLALRQAAADFAKDKYNLTYN-PDCEILVTIGATEALSASLIAILEAGDVVLLPAPAYPGYEPIVNLVGADIVEIDTR-ENDFRLTPEMLETAIIQQGEKLKAVLLNYPTNPTGITYSRQEIASLAEVLKKYDIFVISDEVYSELTYTGQQHVSIAEY--LPNQTILINGLSKSHAMTGWRVGLVYAPEAFIAQIIKSHQYMVTAASTISQFAGVEALSVG--KNDTLPMRQGYIKRRDYIIDKMSKLGFKIIKPSGAFYIFAKIPDSYPQDSFKFCQDFAYQQAVAIIPGVAFGKYGEGYIRLSYAASMEVIETAMARLKVFMESYEG
1GD9 Chain:A ((2-387))-----ALSDRLELVSASEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKGLT-HYGPNIGLLELREAIAEKLKKQNGIEADPKT-EIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVT-D--KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIRDT-GLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRMERVLKERKL


General information:
TITO was launched using:
RESULT:

Template: 1GD9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -285728 for 3424 contacts (-83.4/contact) +
2D Compatibility (PS) -41580 + (NN) -21436 + (LL) 776
1D Compatibility (HY) -27200 + (ID) 7150
Total energy: -382318.0 ( -111.66 by residue)
QMean score : 0.608

(partial model without unconserved sides chains):
PDB file : Tito_1GD9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GD9-query.scw
PDB file : Tito_Scwrl_1GD9.pdb: