Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MRVSQTYGLVLYNRNYREDDKLVKIFTETEGKRMFFVKHASKSKFNAV----LQPLTIAHFILKINDNGLSYIDDYKEVLAFQETNSDLFKLSYASYITSLADVAISDNVADAQLFIFLKKTLELIEDGLDYEILTNIFEVQLLERFGVALNFHDCVFCHRVGLPFDFSHKYSGLLCPNHYYKDERRNHLDPNMLYLINRFQSIQFDDLQTISVKPEMKLKIRQFLDMIYDEYVGIHLKSKKFIDDLSSWGSIMKSD |
| 4FYP Chain:A ((34-261)) | GLSINYPNCRSWHLGVETSNIINFDTVPANCKAYVEDYLITSKQYQYDSKTVNKEAYFYAKGLALKNDTVNVWIFDLDDTLLSSIPYYAKYGYGTENTA---PGAYWSWLESGESTP------------GLPETLHLYENLLELGIEPIIISDRWKKLSEVTVENLKAV---GVTKWKHLILKPNGSKLTQVVYKSKVRNSLVKKGYNIVGNIGD-QWADLVEDTPGRVFKL-----PNPLY------------YVPSLEHHHH----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FYP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56879 for 1685 contacts (-33.8/contact) +
2D Compatibility (PS) -21247 + (NN) 4435 + (LL) 3444
1D Compatibility (HY) -6800 + (ID) 2100
Total energy: -79147.0 ( -46.97 by residue)
QMean score : 0.056
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