Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIAVFASANGSNFQVIAEQF-------PVSFVFSDHRDAYVLERAQNLAIPSFAFELKEFENKAAYEQAVVDLLDKHEIDLVCLAGYMKIVGETLLSAYEGRIINIHPTYLPEFPGAHGIKDAWEAGVDQSGVTIHWVDSGVDTGQVIQQVHVPRLADDSLESFETRIHETEYQLYPAVLDSLGIKRK
1NJS Chain:B ((2-181))
-RVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQLVASGTV
General information:
TITO was launched using:
RESULT:
Template:
1NJS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135596 for 1396 contacts (-97.1/contact) +
2D Compatibility (PS) -19281 + (NN) -11824 + (LL) 208
1D Compatibility (HY) -15200 + (ID) 2850
Total energy: -184543.0 ( -132.19 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_1NJS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NJS-query.scw
PDB file :
Tito_Scwrl_1NJS.pdb
: