Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIKKSVIGFCLGAAALSMFACVDSSQSVMAAEKDKVEITWWAFPTFTQEKAKDGVGTYEKKVIKAFEKKNPNIKVKLETIDFTSGPEKITTAIEAGTAPDVLFDAPG-RIIQYGKNGKLADLNDLFTDQFIKDVNNKNIIQASKSGDKAYMYPISSAPFYMAFNKKMLKDAGVLKLVKEGWTTSDFEKVLKALKNK--GYTPGSFFANGQGGDQGPRAFFANLYSAPI-------TDKEVTKYTTDTKNSVKSMKKIVEWIKKGYLMN--GSQYDGSADIQNFANGQTAFTILWAPAQPKTQAKLLESSKVDYLEVPFPS-EDGKPDLEYLVNGFAVFNNKDENKVKASKKFITFIA---DDKKWGPKDVIRTGAFPVRTSFGDLYKGDKRMMKISKWTQYYSPYYNTIDGFSEMRTLWFPMVQSVSNGDEKPADALKDFTQKANDTIKKAAK |
| 4R6H Chain:A ((28-421)) | -------------------------------ADTAKKTLTIYS--TMSTDSERDTF----RKLAAAFEKEHSDIHVSLH-FPGNDYENMMRVRMAANDLPD-LFDTHGWGKIRYGEYTA-----DLRDMKWTQDLDPNLNSILKNKSGKVYAYPINQAKDGLAYNRNILDRYGIAPPE----TMDDFIKALRTIKEKSKGSIVPFWFA---GYDKSSFAQYYDQFATPLLITDPAHNEKKQLINGTFQWSKFTYLSEILKQMQKEKLINIDAVTAKKSQLIELMAQNKIAFTMQGGTLGQDVAQI---NPNVKVGIIPTPAIHPGDDPIWIGGERYTLAAWKDSPQLKEAKDFIAFMARPANAKQMAEATSLPSGLTNVKADI--FYANDYEYYQDVKVEPYFDRLYLP----NGMWDVLGTVGQELAADILAPQDISQKLGREYKRLREQSET |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31419 for 3140 contacts (-10.0/contact) +
2D Compatibility (PS) -40094 + (NN) -12088 + (LL) 3684
1D Compatibility (HY) -16400 + (ID) 4300
Total energy: -100617.0 ( -32.04 by residue)
QMean score : 0.441
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