Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKETILSVNNLHVDFHTYAGEVKAIRDVNFELKKGETLAIVGESGSGKSVTTRTLIGLNAKNSEISGNVQFKGRNLVELSEEEWTKVRGNEISMIFQDPMTSLDPTMKIGMQIAEPMMIHQKISKKDALKLALELMKDVGIPNAEEHINDYPHQWSGGMRQRAVIAIALAADPEILIADEPTTALDVTIQAQILNLMKKIQAERDSSIVFITHDLGVVAGMADRVAVMYAGKIVEFGTVDEVFYNPQHPYTWGLLNSMPTTDTESGSLESIPGTPPDLLNPPKGDAFAARNEFALDIDHEEEPPYFKVSETHFAATWLLDERSPKVLPPLPIQKRWEKWNEIEGRKA |
2FGK Chain:D ((27-240)) | ---------------------------NINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPEN---GQVLIDGHDLA-LADPNWLR---RQVGVVLQDNVL-LNRSIIDNISLANPGMSVEKVIYAAKLAGAHDFISELR-EGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDQATSALDYESEHVIMRNMHKICKGR--TVIIIAHRLSTVKN-ADRIIVMEKGKIVEQGKHKELLSEPESLYSYLYQLQSD---------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FGK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96242 for 1643 contacts (-58.6/contact) +
2D Compatibility (PS) -22920 + (NN) -8533 + (LL) 6816
1D Compatibility (HY) -14800 + (ID) 3550
Total energy: -139229.0 ( -84.74 by residue)
QMean score : 0.345
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