Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVLEQKLDHLVSQILLKAENQHELLFGTCQSDVKLTNTQEHILMLLSQ--E-QLTNSDLAKKLNISQAAVTKAVKSLISQDMLKANKDSKDARITYFELSELAKPIADEHTHHHDNTLGVYGRLVNHFSKDEKVVLERFLDLFSRELEG
3BRO Chain:A ((6-140))
---------RDLGRLLKIASNQMSTRFDIFAKKYDLTGTQMTIIDYLSRNKNKEVLQRDLESEFSIKSSTATVLLQRMEIKKLLYRKVSGKDSRQKCLKLTKKANKLETIILSYMD---SDQSQMTSGLNKEEVVFLEKILKRMIES---
General information:
TITO was launched using:
RESULT:
Template:
3BRO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49963 for 823 contacts (-60.7/contact) +
2D Compatibility (PS) -13990 + (NN) -6861 + (LL) 1272
1D Compatibility (HY) -7200 + (ID) 1450
Total energy: -78192.0 ( -95.01 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_3BRO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BRO-query.scw
PDB file :
Tito_Scwrl_3BRO.pdb
: