Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDAKTKYKAKKIKAVFFDIDDTLRVKDTGYMPPSILKVFKALKDKGIVVGIASGRARYGVPKEVQDLNADYCVKLNGAYVKDKDKNIIFHRPIPAEYVEQYKKWADTVGIKYGLAGRHEAVLSDRDDLVNDAIDIVYSDLEVNPDFNKEHDIYQMWTFEDKGDSLHLPEPLDEHLRLIRWHDHSSDVVLKGTSKALGVSKVVEHLGLKPENILVFGDELNDLELFDYAGLAVAMGVSHPEAQKKADFITKKVEEDGILYALEELGLIEKELTFPQVDIENTEGPVAVIKTNHGDMTVKLFPDHAPKTVANFI-------GLAKQG---YYDGIIFHRIIPDFMIQGGDPT-GTGMGGESIYGESFEDEFSEELYNVRGALSMANAGPNTNGSQFFIVQNTKIPYAKKELERGGWPTPIAELYAGQGGTPHLDRRHSVFGQLVNQSSFEVLDEIAAVE-TGSQD-KPLEDVVILTIEVKE |
| 2POY Chain:B ((26-181)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGDGTGGESIYG-KFRDENFVYTHDAPFLLSMANAGPNTNGSQFFI---TTVP------------------------CPWLDGKHVVFGKVL-----EGMEVVKSIEKCGSQNGKPTKSVCITASGV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2POY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52017 for 1081 contacts (-48.1/contact) +
2D Compatibility (PS) -14891 + (NN) -5674 + (LL) 19884
1D Compatibility (HY) -10400 + (ID) 3750
Total energy: -66848.0 ( -61.84 by residue)
QMean score : 0.463
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