Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKERVDVLAYKQGLFDTREQAKRGVMAGMVINVINGERYDKPGEKVADDTELKLKGEKLKYVSRGGLKLEKALQVFEISVADKLTIDIGASTGGFTDVMLQSGARLVYAVDVGTNQLVWKLRQDHRVRSMEQYNFRYAQKED----FKEGLPEFASIDVSFISL---NLILPALKEILVDGGQVVALIKPQFEAGREQIGKNGIVK-DKLVHEKVLTTVTNFTKDYGYTVKHLDFSPIQGGHGNIEFLMHLQKCQDPQNLVLDQIQDVIEKAHKEFKKNEEE |
| 2O57 Chain:A ((81-235)) | --------------------------------------------------------------------------------QRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRN-EEYNNQAGL-ADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITD-PMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRTFSRPDSLVHHYSKVKAELIKRSSEIASFCSPEFQANMKRGLEHWIEGGR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O57.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27668 for 1000 contacts (-27.7/contact) +
2D Compatibility (PS) -14939 + (NN) -1959 + (LL) 6316
1D Compatibility (HY) 0 + (ID) 600
Total energy: -38850.0 ( -38.85 by residue)
QMean score : 0.308
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