Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDIKAEIQKLAKEIGISKIGFTTADNFDYLEKSLRA---------------SVEEGRNSGFEHKVIEDRIYPE---RLLESAKTIISIGVAYPHKLP--QQPQKTSYKRGKITPNSWGLDYHYVVGEKLDRLSKGIEELCRDFPLQQKAMVDTGALVDTAVAQRAGIGFIGKNGLVIS--KEYGSYMFLGELITNLEIEPDKPVDYDCGDCRRCLDACPTSCLIGDGSMNAKRCLSFQTQDKGMMDIEFRKKIKTVIYGCDICQICCPYNKGINNPLATEIDPELAQPELIPFLSLSNGQFKEKFGMIAGSWRGKNILQRNAIIALANAHDKTAVVKLIEIIDKNNNPIHTATAIWALGEIVKKPNDEILEFMSNLTLKDEDSRKELELIRHKWQF |
| 4IFD Chain:C ((6-393)) | LE-----TIEIHPITFPPEVLARISPELSLQRHLSLGIRPCLRKYEEFRDVAIENNTLSRYADAGNIDTKNNILGSNVLKSGKTIVITSITGGIIEETEDIIANYASVYPVVEVERGRVGAC---TDEEMTISQKLHDSILH----------SRILPKKALKVKAGVRSANEDGTFSVLYPDELKRKWSYVLYAKIVVLSRT---------GPVFDLCWNSLMYALQSVKLPRAFIDERASDLRMTIRTRGRSATI-----------------RETYEIICDQTKSVP---LMINAKNIAFASNYGIVELDPECQL-QNTVLIADLDTEAEETSIHSTISILAAPSGN---YKQLTLMGGGAKITPEMIKRSLLLSRVRADDLSTRFNI------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IFD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8750 for 2234 contacts (3.9/contact) +
2D Compatibility (PS) -32393 + (NN) 4899 + (LL) 4568
1D Compatibility (HY) -6400 + (ID) 2050
Total energy: -22626.0 ( -10.13 by residue)
QMean score : 0.076
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