Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKDRYILAVESSCDETSVAILKNDKELLANIIASQVESHKRFGGVVPEVASRHHVEVVTTCFEDALQEAGIVASDLDAVAVTYGPGLVGALLVGMAAAKAFAWANKLPLIPVNHMAGHLMAARDVKELQYPLLALLVSGGHTELVYVSGPGDYKIVGETRDDAVGEAYDKVGRVMGLTYPAGREIDQLAHKGQDTYHFPRAMIKEDHLEFSFSGLKSAFINLHHNAEQKGEALVLEDLCASFQAAVLDILLAKTQKALLKYPVKTLVVAGGVAANQGLRERLATDISP-DIDVVIPPLRLCGDNAGMIALAAAIEFEKENFASLKLNA-KPSLAFEGL----- |
2IVN Chain:A ((1-325)) | ---MLALGIEGTAHTLGIGIV-SEDKVLANVFDTL---TTEKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQGPGLGPALRVVATAARALAVKYRKPIVGVNHCIAHVEITKMFGV--KDPVGLYVSGGNTQVLALEG-GRYRVFGETLDIGIGNAIDVFARELGLGFPGGPKVEKLAEKGEKYIELPYAVKG---MDLSFSGLLTEAIRKYRSGKYR-----VEDLAYSFQETAFAALVEVTERAVAHTEKDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKAGISFRLEETIVKQKFRTDEVEIVWH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -253972 for 2937 contacts (-86.5/contact) +
2D Compatibility (PS) -34811 + (NN) -18670 + (LL) 1200
1D Compatibility (HY) -21200 + (ID) 5050
Total energy: -332503.0 ( -113.21 by residue)
QMean score : 0.565
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