Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTNKIAPSILAADYANFANELKRIEETTAEYVHIDIMDGQFVPNISFGADVVSSMRKHSK-LVFDCHLMVVDPERYIEDFAQAGADIMTIHVEA----TKHIHGALQKIKEAGMKAGVVINPGTPVESLIPILD--LVDQILIMTVNPGFGGQAFIPEMMSKVKTVAAWRKEYGHHYDIEVDGGIDNTTIKAAAEAGANVFVAGSYLFKASDLPAQVETLRVALDD
1TQX Chain:B ((8-221))
-----IAPSVLASNISKLAEETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYTKSIFFDVHLMVEYPEKYVPLLKTSNQ--LTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFL---RKKY-KNLNIQVDGGLNIETTEISASHGANIIVAGTSIFNAEDPKYVIDTMRVSVQK
General information:
TITO was launched using:
RESULT:
Template:
1TQX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -187990 for 1794 contacts (-104.8/contact) +
2D Compatibility (PS) -22400 + (NN) -10581 + (LL) 616
1D Compatibility (HY) -24800 + (ID) 4450
Total energy: -249605.0 ( -139.13 by residue)
QMean score : 0.686
(partial model without unconserved sides chains):
PDB file :
Tito_1TQX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TQX-query.scw
PDB file :
Tito_Scwrl_1TQX.pdb
: