Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGEREGRVDSLLDTLYNLSEEKEAFFITQKMKKLFSVKLSKSKVILVAACLLLAGSGTAYAAHELTKQSVSVSINGKKKHIRTHANTVGDLLETLDIKTRDEDKITPAKQTKITADMDVVYEAAKPVKLTINGEEKTLWSTAKTVGALLDEQDVDVKEQDQIDPAIDTDISKDMKINIEPAFQVTVNDAGKQKKIWTTSTTVADFLKQQKMNIKDEDKIKPALDAKLTKGKADITITRIEKVTDVVEEKIAFDVKKQEDASLEKGKEKVVQKGKEGKLKKHFEVVKENGKEVSRELVKEETAEQSKDKVIAVGTKQSSPKFETVSASGDSKTVVSRSNESTGKVMTVSSTAYTASCSGCSGHTATGVNLKNNPNAKVIAVDPNVIPLGSKVHVEG------------YGYAIAADTGSAIKGN-KIDVFF---PEKSSAYRWGNKTVKIKILN--------- |
| 2PNW Chain:A ((7-371)) | FSIDEVSFRDL--------------------PGWGQDDPRKLFPAMATILSHL---------------------RNAKPYRTGALGITAAELVSLLELAERGQVNSPEQARQFFETNSVPFRISPSGFVTAFYEPELEVSATPDD-------------------------VWRYPIYRRPPELVDIDNDNRPDGFDP---------SYAFGKADEEGISYFPDRRAIDEGCLRGRGLEIAWARS---KVDLFFVHVQGAARLVFPDGAIKRITYAAKAGHVFSPIGRLLLD-RGELDPKTISMQTIRQWLADHPDEVDGVLWH-----NRSYIFFREAGPIAAA---------------------KVPLVAG---RALAVDRLIHTFGLPFFIHAPTLTHLDDGKPFARLMLALDTGSAIVGPARGDIFTGSGFEAGELAGTVRNEADFYILLPRIAAERYR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PNW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 120657 for 2608 contacts (46.3/contact) +
2D Compatibility (PS) -34354 + (NN) -1192 + (LL) 7072
1D Compatibility (HY) -2000 + (ID) 2450
Total energy: 87733.0 ( 33.64 by residue)
QMean score : 0.058
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