Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIPEKKSIAIMKELSIGNTKQMLMINGVDVKNPLLLFLHGGPGTPQIGYVRHYQKELEQYFTVVHWDQRGSGLSYSKRISHHSMTINHFIKDTIQVTQWLLAHFSKSKLYLAGHSWGSILALHVLQQRPDLFYTYYGISQVVNPQDEESTAYQHIREISESKKASILSFLTRFIGAPPWKQDIQHLIYRFCVELTRGGFTHRHRQSLAVLFQMLTGNEYGVRNMHSFLNGLRFSKKHLTDELYRFNAFTSVPSIKVPCVFISGKHDLIVPAEISKQYYQELEAPEKRWFQFENSAHTPHIEEPSLFANTLSRHARHHL- |
1Y37 Chain:A ((1-294)) | MFEG----FERRLVDVGDVTINCVVGG---SGPALLLLHGFPQN--LHMWARVAPLLANEYTVVCADLRGYGGSSKPVGAPDHANYS--FRAMASDQRELMRTLGFERFHLVGHDRGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVD----RFVARAYWHWYFLQQPAPYPEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRD----PAAIHGSCCDYRAGGT----IDFELDHGDLGRQVQCPALVFSGSAGLMHSLFEMQVVWAPR--LANMRFASLPGGHFFVDRFPDDTARILREFLSDARS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y37.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145202 for 2655 contacts (-54.7/contact) +
2D Compatibility (PS) -30564 + (NN) -5668 + (LL) 1616
1D Compatibility (HY) -6000 + (ID) 2100
Total energy: -187918.0 ( -70.78 by residue)
QMean score : 0.355
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