Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSERNQRKVYQGRVVSDKMDKTITVVVETYKKHTLYGKRVKYSKKFKAHDEN--NQAKIGDIVKIMETRPLSATKRFRLVEVVEEAVII
5A2Q Chain:L ((67-150))
---SIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKAAG--
General information:
TITO was launched using:
RESULT:
Template:
5A2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2399 for 494 contacts (-4.9/contact) +
2D Compatibility (PS) -8734 + (NN) 820 + (LL) 692
1D Compatibility (HY) -3600 + (ID) 1250
Total energy: -14471.0 ( -29.29 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_5A2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5A2Q-query.scw
PDB file :
Tito_Scwrl_5A2Q.pdb
: