Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKIAIAAITATSILALSACSSGDKEVIAKTDAGDVTKGELYTNMKKT------------AGASVLTQLVQEKVLDK-----KYKVSDKEIDNKLKEYKTQLGDQYTALEKQYGKDYLKEQVKYELLTQKAAKDNIKVTDADIKEYWEGL------KGKIRASHILVADKKTAEEVEKKLKK------GEKFEDLAKEYSTDS-SASKGGDLGWF-AKEGQMDETFSKAAFKLKTGEVS-DPVKTQYGYHIIKKTEERGK----YDDMKKELKSEVLEQKLNDNAAVQEAVQKVMKKADIEVKDKDLKDTFNTSSTSNSTSSSSSNSK
3RFW Chain:A ((22-273))-------------------------ATVATVNGKSISDTEVSEFFAPMLRGQDFKTLPDNQKKALIQQYIMQDLILQDAKKQNLEKDPL-YTKEL--------------------DRAKDAILVNVYQEKIL-NTIKIDAAKVKAFYDQNKDKYVKPARVQAKHILVATEKEAKDIINELKGLKGKELDAKFSELAKEKSIDPGSKNQGGELGWFDQ--STMVKPFTDAAFALKNGTITTTPVKTNFGYHVILKENSQAKGQIKFDEVKQGIENGLKFEEF-KK-VINQKGQDLLNSAKVEYK-------------------------


General information:
TITO was launched using:
RESULT:

Template: 3RFW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 617 -45181 -73.23 -209.17
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -73.23
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.605

(partial model without unconserved sides chains):
PDB file : Tito_3RFW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RFW-query.scw
PDB file : Tito_Scwrl_3RFW.pdb: