Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLTKRLLTIYIMLLGLIAWFPGAAQAEEKQPAVPAVFLMKTIEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEY------HIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWTEE
3OR5 Chain:A ((28-168))--------------------------ADARPTPAPSFSGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNE---QLPNVKNYMKTQGIIYPVMMATP-ELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVK-


General information:
TITO was launched using:
RESULT:

Template: 3OR5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 614 -90033 -146.63 -671.89
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -146.63
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.642

(partial model without unconserved sides chains):
PDB file : Tito_3OR5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OR5-query.scw
PDB file : Tito_Scwrl_3OR5.pdb: