Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKIYVLDTNVLLQDPNAIFSFEENEVVIPAVVLEEVDSKKRYMDEVGRNARHVSKLIDALRQKGRLHEHVPLDTGGTLRIELNHRSFHQLQEIFIEKTNDNRILAVAKNLSLEEETKENGRPVILVSKDVLVRVKADAIGLLAEDFLNDRVVDNDEMYSGYKDLYISQQLFSSFYGKNQISVNDVKQHAFYPNQFALMKDELGGSSSAVGIADKTGTVLKRLVFDDEHIWGIRPKNVQQTMALELLLREDIPLVTLIGKAGTGKTLL-ALAAGLLQTED-LGIYKKLVVARPIVP-VGKDIGYLPGEKEEKLKPWMQPIFDNLEFLFNAKKPG-----------------------E---LDAILAGIGSIQVEALTYIRGRSIPDQFIIIDEA-QNLTRHEVKTLLTRVG---EGSKIVL-MGDPEQIDHPYLDSLNNGLAYVVERFKGQPISGSVKLLKGERSGLAQLAADLL
4PL0 Chain:A ((369-542))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FTGKMYSLTGPSGSGKSTLVKIISGYYKNYFGDIYLNDISLRNISDEDLNDAIYYLTQDD--YIF--MDTLRFNLRLANYDASENEIFKVLKLANLSVVNNEPVSLDTHLINRGN-NYSGGQK--QRISLARLFLRKPAIIIIDEATSALDYINESEILSSIRTHFPDALIINISHRINLL----------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4PL0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 497 -49645 -99.89 -354.60
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -99.89
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.379

(partial model without unconserved sides chains):
PDB file : Tito_4PL0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PL0-query.scw
PDB file : Tito_Scwrl_4PL0.pdb: