Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIKKFTAASMQEAALLIRKELGNEAVILNSKKIKKRKWFGLVNKPAVEVIAVLDQDFLEKKTPQKAAEPKQTLKTPVSSPKIEERTYPPQIPAQQELGDFSAYQSVLPEPLRKAEKLLQETGIKESTKTNTLKKLLRFSVEAG---GLTEENVVGKLQEILCDMLPSADK------WQEPIHSKYIVLFGSTGAGKTTTLAKLAAISMLEKHKKIAFITTDTYRIAAVEQLKTYAELLQAPLEVCYTKE----EFQQAKELF--SEYDHVFVDTAGRNFKDPQYIDELKETIPFESSIQSFLVLSATAKYEDMKHIVKRFS-SVPVNQYIFTKIDETTSLGSVFNILAESKIGVGFMTNGQNVPEDIQTVSPLGFVRMLCR
3E70 Chain:C ((52-324))-----------------------------------------------------------------------------------------------------------VDKALDELEIDLLEADVALEVVDALREKIKQKLVGKKVRIG--GKIIEEAVKEAVSEILETSRRIDLIEEIRKAEKPYVIMFVGFNGSGKTTTIAKLANWLK-NHGFSVVIAASDTFRAGAIEQLEEHAKRIGVKVIKHSYGADPAAVAYDAIQHAKARGIDVVLIDTAGRSETNRNLMDEMKKIARVTKPNLVIFVGDALAGN-AIVEQARQFNEAVKIDGIILTKLDADARGGAALSISYVIDAPILFVGVGQGY-DDLRPFEKEWFLERIFG


General information:
TITO was launched using:
RESULT:

Template: 3E70.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1297 -157583 -121.50 -620.40
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain C : 0.66

3D Compatibility (PKB) : -121.50
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.564

(partial model without unconserved sides chains):
PDB file : Tito_3E70.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3E70-query.scw
PDB file : Tito_Scwrl_3E70.pdb: