Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRSTLRKDLIELFSQAGNEFISGQKISDALGCSRTAVWKHIEELRKEGYEVEAVRRKGYRLIKKPGKLSESEIRFGLKTEVMGQHLIYHDVLSSTQKTAHELANNNAPEGTLVVADKQTAGRGRMSRVWHSQEGNGVWMSLILRPDIPLQKTPQLTLLAAVAVVQGIEEAAGIQTDIKWPNDILINGKKTVGILTEMQAEEDRVRSVIIGIGINVNQQPNDFPDELKDIATSLSQAAGEKIDRAGVIQHILLCFEKRYRDYMTHGFTPIKLLWESYALGIGTNMRARTLNGTFYGKALGIDDEGVLLLETNEGIKKIYSADIELG
3EFR Chain:A ((1-230))---------------------------------------------------------------------------------MFKNLIWLKEVDSTQERLKEW---NVSYGTALVADRQTKGRGGLGRKWLSQEG-GLYFSFLLNPK-EFENLLQLPLVLGLSVSEALEEITEIPFSLKWPNDVYFQEKKVSGVLRELSKDK-----LIVGIGINVNQR--EIPEEIKDRATTLYEITGKDWDRKEVLLKVLKRISENLKKFKEKSFKEFKGKIESKMLYLGEEVKLLG-EGKITGKLVGLSEKGGALILTEEGIKEILSGEFSL-


General information:
TITO was launched using:
RESULT:

Template: 3EFR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1247 -126709 -101.61 -550.91
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -101.61
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.456

(partial model without unconserved sides chains):
PDB file : Tito_3EFR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EFR-query.scw
PDB file : Tito_Scwrl_3EFR.pdb: