Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKRKLGTSDLDISEVGLGCMSLGTE---KNKALSILDEAIELGINYLDTADLYDR--GRNEEIVGDAIQN----RRHDIILATKAGNRWDDGSEGWYWDPSKAYIKEAVKKSLTRLKTDYIDLYQLHGGTIEDNIDETIEAFEELKQEGVIRYYGISSIRPNVIKEYVK-----KSNIVSIMMQFSLFDRRPE-E-WLPLLEEHQISVVARGPVAKGLLTEKPLDQASESMKQNGYLSYSFEELTNARKAMEEVA--PDLSMTEKSLQYLLAQPAVASVITGASKIEQLRENIQAANARRLTEEEIKALQSHTKQDIYKAHRS
3N6Q Chain:A ((13-336))MQYRYCGKSGLRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWP--GPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYL---------------LTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQALNNLTFSTKELAQIDQHIADGE------


General information:
TITO was launched using:
RESULT:

Template: 3N6Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1579 50201 31.79 177.39
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : 31.79
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.531

(partial model without unconserved sides chains):
PDB file : Tito_3N6Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3N6Q-query.scw
PDB file : Tito_Scwrl_3N6Q.pdb: