Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTIDHSVTNTEQLEQQNPAIKTKLKLKKLKDQVIVITGASSGIGLVTARMAAEKGAKVVAAARNEEALKELTDELKEKGHDAIWVKADVGKEEDVNRIAETAISTFGRFDTWVNNA-AVSTFGHAMDVTVEDMKRMFDTNFWGPVYGTRAAVKHYTGRGVPGALINVGSLFG-DRGTVIQSTYASAKFALHGWTESIRMELEKEQAPVSVTLIHPGRIDTPYN--------EHAHSYLDKQPAHYRSMIYPPEAVAEAILFAAEHPKRDMYIGSQAKAIAMLGALFPRLTDRLMEKIMYHSQHAERPSNPREESALYDAGCGMHDRGTNKGWMRSRSYYTKATKRPIVSAAVVAGLVAWAAAKRCR
3TOX Chain:I ((4-235))--------------------------SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARG--IRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKR--IARPEEIAEAALYLA-------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3TOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain I - contact count / total energy / energy per contact / energy per residue : 1157 -69012 -59.65 -310.86
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain I : 0.70

3D Compatibility (PKB) : -59.65
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.586

(partial model without unconserved sides chains):
PDB file : Tito_3TOX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TOX-query.scw
PDB file : Tito_Scwrl_3TOX.pdb: