Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------MRLTHPTPCPENGETMIDRRRSAWRFSVPLV--CLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHG--PGLVVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQPAGPLDY
3GFD Chain:A ((34-255))SVEHIPFSHTRYPEQEMRMRSQEFYELLNKRRSVRFISSEHVPMEVIENVIKAAGTAPSGAHT-----EPWTFVVVKD--------PDMKHKIREIIEEEEEINYMKRMGKRWVTDLKKLRTNWIKEYLDTAPVLILIFKQVHGFNGKKKVHYY-------NEISVSIACGLLLAALQNA---------------------------GLVTVTTTPLNCGPRLRVLLGRPSHEKLLVLLPV----GYPSRDATV------PDLKRKALDQIMVTVHH


General information:
TITO was launched using:
RESULT:

Template: 3GFD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56233 for 1398 contacts (-40.2/contact) +
2D Compatibility (PS) -21651 + (NN) -5272 + (LL) 4608
1D Compatibility (HY) -4800 + (ID) 1350
Total energy: -84698.0 ( -60.59 by residue)
QMean score : 0.244

(partial model without unconserved sides chains):
PDB file : Tito_3GFD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GFD-query.scw
PDB file : Tito_Scwrl_3GFD.pdb: