Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCTARTAEEIFVETIAVKTRILNDRVLLEAARAIGDRLIAGYRAGARVFMCGNGGSAADAQHFAAELTGHLIFDRPPLGAEALHANSSHLTAVANDYDYDTVFARALEGSARPGDTLFAISTSGNSMSVLRAAKTARELGVTVVAMTGESGGQLAE---FADFLINVPSRDTGRIQESHIVFIHAISEHVEHALFAPRQ
5BY2 Chain:A ((4-193))
-----QIKNNFTESIQTQIAAS--ELLGPSIEHAGMMMVQCLLGGNKIISCGNGGSAGHAQHFCAQLLNKYETERPSLPAISLNSDISTITSIANDYQYDEVFSKQIRALGHNGDVLLAISTSGNSRNVVKAIESAVSRDIPIIALTGFDGGDISGLLGEGDVEIRVPSARTSRIQEVHLVVLHSLCEIIDTTLFPQ--
General information:
TITO was launched using:
RESULT:
Template:
5BY2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124527 for 1558 contacts (-79.9/contact) +
2D Compatibility (PS) -20564 + (NN) -11006 + (LL) 624
1D Compatibility (HY) -12000 + (ID) 3450
Total energy: -170923.0 ( -109.71 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_5BY2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5BY2-query.scw
PDB file :
Tito_Scwrl_5BY2.pdb
: