Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSDLTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSEEVLLERLKGR-------------------------------GRADDTDDVILNRMKVYRDETAPLLEYYRDQLKTVDAVGTMD--EVFARALRALGK
4QBF Chain:A ((1-213))
MNIVLMGLPGAGKGTQAERIVEKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVRERLSKSDCERGFLLDGFPRTVAQAEALEELLEEMGRPIDYVINIQVDKEELIARLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVTKRLEVNMKQTAPLLAFYDSKEVLVNVNGQQDIQDVFADVKVILG-
General information:
TITO was launched using:
RESULT:
Template:
4QBF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54853 for 1392 contacts (-39.4/contact) +
2D Compatibility (PS) -20481 + (NN) -17045 + (LL) 64
1D Compatibility (HY) -16000 + (ID) 4350
Total energy: -112665.0 ( -80.94 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_4QBF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QBF-query.scw
PDB file :
Tito_Scwrl_4QBF.pdb
: