Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --MAGWFAHTLRPAMLAAGRSDRLGRIVE-RSPLTRGVVRRFVPGDTLDDVVDIVTALRDSGRYLSIDYLGENVTDADDAAAAVRAYLGLLDVLGRRGDIACDGVRPLEVSLKLSALGQALDRDGQKIALDNAR-AICERAERVGAWVTVDAEDHTTTDSTLSISGDLRVDFPWLGTVVQAYLRRT-LADCAELAAVGARVRLCKGAYDEPASVAYRDAAQVTDSYLRCLRVLTAGRGYPMVATHDPVIIAAVPGITRESGRSQGDFEYQMLYGVRDDEQRRLTGAGNHVRVYVPFGTRWYGYFLRRLAERPANLAFFLRALTDRRRARGCAER |
1YX1 Chain:A ((5-254)) | LHPVSISLSSYGADLVRSRGQASFLPLLAMAGAQRVELREELFAGP--PDTEALTAAIQLQGLECVFSSPLELWREDGQLNPELEPTLRRAEACG--AGWLKVSLGLLPEQPDLAALGRRLARHGLQLLVENDQTPQGGRIEVLERFFRLAERQQ---------------------------LDLAMTFDIGNWRWQE----------QAADEAALRLGRYVGYVHCKAVIRNRDGK---------------------LVAVPPSAADLQYWQRLLQH-----FPEGVARAIEYPLQG----------DDLLSLSRRHIAALARLGQ------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YX1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68381 for 2001 contacts (-34.2/contact) +
2D Compatibility (PS) -25596 + (NN) -5522 + (LL) 6196
1D Compatibility (HY) -5200 + (ID) 1450
Total energy: -99953.0 ( -49.95 by residue)
QMean score : 0.254
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