Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSPLAPVGVFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEIRAHALAIGDDLVGRGVKALVIACNSASSACLRDARERYQVPVVEVILPAVRRAVAATRNGRIGVIGTRATITSHAYQDAFAA-ARDTEITAVACPRFVDFVERGVTSGRQVLGLAQGYLEPLQRAEVDTLVLGCTHYPLLSGLIQLAMGENVTLVSSAEETAKEVVRVLTEIDLLRPHDAPPATRIFEATGDPEAFTKLAARFLGPVLGGVQPVHPSRIH
3IST Chain:A ((2-268))
-NAMKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFLVDRGIKMLVIACNTATAAALYDIREKLDIPVIGVIQPGSRAALKATRNNKIGVLGTLGTVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIAKKVVAESLLPLKSTKIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDAT-DEEIEHRFFTTGSTQIFKDIAKDWLNMPDMTVEHIKLG---
General information:
TITO was launched using:
RESULT:
Template:
3IST.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -242812 for 2435 contacts (-99.7/contact) +
2D Compatibility (PS) -29643 + (NN) -14013 + (LL) 480
1D Compatibility (HY) -23200 + (ID) 5400
Total energy: -314588.0 ( -129.19 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_3IST.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IST-query.scw
PDB file :
Tito_Scwrl_3IST.pdb
: