Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVANLKDLLAEGVSGRGVLVRSDLNVPLDEDGTITDAGRIIASAPTLKALLDADAK-VVVAAHLGRPKDGPDP-TLSLAPVAVALGEQLGRHVQLAGDVVGADALARAEGLTGGDILLLENIRFDKRETSKNDD--------DRRALAKQLVELVGTGGVFVSDGFGVVHRKQASVYDIATLLPHYA-GTLVADEMRVLEQLTSSTQRPYAVVLGGSKVSDKLGVIESLATKADSIVIGGGMCFTFLAA-QGFSVGTSLLEDDMIEVCRGLLETYHD---VLRLPVDLVVTEKFAADSP--PQTVDVGAVPNGLMGLDIGPGSIKRFSTLLSNAGTIFWNGPMGVFEFPAYAAGTRGVAEAIVAATGKGAFSVVGGGDSAAAVRAMNIPEGAFSHISTGGGASLEYLEGKTLPGIEVLSREQPTGGVL |
| 2PAA Chain:A ((13-415)) | -------------LKGKRVIMRVDFNVPM-KNNQITNNQRIKAAIPSIKHCLDNGAKSVVLMSHLGRPDGIPMPDKYSLEPVADELKSLLNKDVIFLKDCVGPEVEQACANPDNGSIILLENLRFHVEEEGKGKDSSGKKISADPAKVEAFRASLSKLGDVYVNDAFGTAHRAHSSM--VGVNLPQKASGFLMKKELDYFSKALEKPERPFLAILGGAKVKDKIQLIKNMLDKVNFMIIGGGMAYTFLKELKNMQIGASLFDEEGATIVKEIMEKAEKNGVKIVFPVDFVTGDKFDENAKVGQATIESG-IPSGWMGLDCGPESIKINAQIVAQAKLIVWNGPIGVFEWDAFAKGTKALMDEVVKATSNGCVTIIGGGDTATCCAKWGT-EDKVSHVSTGGGASLELLEGKILPGVEALSN-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2PAA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -260829 for 3399 contacts (-76.7/contact) +
2D Compatibility (PS) -41818 + (NN) -18756 + (LL) 1132
1D Compatibility (HY) -33600 + (ID) 7650
Total energy: -361521.0 ( -106.36 by residue)
QMean score : 0.600
|
|
|