Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTCEMRESALARLGRALADPTRCRILVALLDGVCYPGQLAAHLGLTRSNVSNHLSCLRGCGLVVATYEGRQVRYALADSHLARALGELVQVVLAVDTDQPCVAERAASGEAVEMTGS
2KKO Chain:A ((11-95))
------LLDQVARVGKALANGRRLQILDLLAQGERAVEAIATATGMNLTTASANLQALKSGGLVEARREGTRQYYRIAGEDVARLFALVQV---------------------------
General information:
TITO was launched using:
RESULT:
Template:
2KKO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89842 for 581 contacts (-154.6/contact) +
2D Compatibility (PS) -9263 + (NN) -4304 + (LL) 2868
1D Compatibility (HY) -2000 + (ID) 1300
Total energy: -103841.0 ( -178.73 by residue)
QMean score : 0.770
(partial model without unconserved sides chains):
PDB file :
Tito_2KKO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KKO-query.scw
PDB file :
Tito_Scwrl_2KKO.pdb
: