Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATSKVERLVNLVIALLSTRGYITAEKIRSSVAGYSDSPSVEAFSRMFE-RDKNELRDLGIPLEVGRVSALEPTEGYRINR--DAYALSPVELTPDEAAAVAVATQLWESP--ELITATQGALLKLRAAG-----VDVDPLDTGAPVAIASAAAV-SGLRGSEDVLGILLSAIDSGQVVQFSHRSSRAEPYTVRTVEPWGVVTEKGRWYLVGHDRDRDATRVFRLSRIGAQVTPIGPAGATTVPAGVDLRSIVAQ-----KVTEVPTGEQATVWVAEGRATALRRAGRSAGPRQLGGR---DGEVIELEIRSSDRLAREITGYGADAIVLQPGSLRDDVLARLRAQAGALA------------------------- |
| 4RNZ Chain:A ((1-369)) | --------MERLVWDKLTLLGFLEKNHIPQKLYYNLSSQDKELSAEIQSNVTYYTLRDANNTLIQALIP-ISQDLQIHIYKKGEDYFLDFIPIIFTRKEKTLLLS-LQTSPYQDIIKATNDPLLANQLMNAYKKSVPFKRLVKNDKIAIVYTRDYRVGQAFGQPTIKMAMVSSRSNQYYLFSHSNGH--YYDSKAQEVAGFLLET----PVKYTRISSPFSYGRFHRPHYGVDYAAKHGSLIHSASDGRVGFMGVKAGYGKVVEIHLNELRLVYAHMSAFANGLKKGSFVKKGQIIGRVGSTGPHLHFGVYKNSRPIN-PLGYIRTAKSKLHGKQREVFLEKAQRSKQKLEELLKTHSFEKNSFYLLEGFLEHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RNZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15780 for 2345 contacts (-6.7/contact) +
2D Compatibility (PS) -33199 + (NN) 2001 + (LL) 1628
1D Compatibility (HY) -9200 + (ID) 3050
Total energy: -57600.0 ( -24.56 by residue)
QMean score : 0.159
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