Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----MGSADERRFEVLRAIVADFVATQEPIGSKSL-VERHNLGVSSATVRNDMAVLEAEGYITQPHTSSGRVPTEKGYREFVDRLEDVKPLSSAERRAIQSFLESGVDLDDVLRRAVRLLAQLTRQVAVVQYPTLSTSTVRHLEVIALTPARLLMVVITDSGRVD-QRIVELGDVIDDHQLAQLREILG-QALEGKKLSAASVA-VADLASQLGGAGGLGDAVGRAATVLLESLVEHTEERLLLGGTANLTRNAADFGGSLRSI--LEALEEQVVVLRLLAAQQEAGKVTVRIGHETASEQMVGTSMVSTAYGTAHTVYGGMGVVGPTRMDYPGTIASVAAVALYIGDVLGAR |
1K1Q Chain:A ((1-344)) | MIVIFVDFDYFFAQVEEVLNPQYKGKPLVVSVYSANYEARKLGVKAGMPIIKAMQIAPSAIYVPMRKPIYEAFSNRIMNLLNKHADKIEVASID-----EAYLDVTNKVEGNFENGIELARKIKQEILEKEKITVT---------VGVAPNKILAKIIADKSKPNGLGVIRPTEVQDFLNELDIDEIPGIGSVLARRLNELGIQKLRDILSK--NYNELEKITGKAKALYLLKLAQNKYSEPVENKSKIPHGRYLTLPYNTRDVKVILPYLKKAINEAYNKVNGIPMRITVIAIMED-LDILSKGKKFKHGISIDNAYKVAEDLLRELLVRDKRR--NVRRIGVKLDNIIIN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K1Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70599 for 2457 contacts (-28.7/contact) +
2D Compatibility (PS) -33807 + (NN) -5216 + (LL) 2132
1D Compatibility (HY) -9600 + (ID) 1650
Total energy: -118740.0 ( -48.33 by residue)
QMean score : 0.140
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