Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTERTLVLIKPDGIERQLIGEIISRIERKGLTIAALQLRTVSAELASQHYAEHEGKPFFGSLLEFITSGPVVAAIVEGTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFPGA
1S5Z Chain:A ((9-138))
--ERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMVFEGKGVVASARLMIGVTNPL-ASAPGSIRGDFGVDVGRNIIHGSDSVESANREIALWF---
General information:
TITO was launched using:
RESULT:
Template:
1S5Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86779 for 1022 contacts (-84.9/contact) +
2D Compatibility (PS) -13957 + (NN) -4915 + (LL) 212
1D Compatibility (HY) -12400 + (ID) 3550
Total energy: -121389.0 ( -118.78 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_1S5Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S5Z-query.scw
PDB file :
Tito_Scwrl_1S5Z.pdb
: