Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGIVGVGIDLVSIPDFAEQVDQPGTVFA-ETFTPGERRDASDKSSSAARHLAARWAAKEAVIKAWSGSRFAQRPVLPEDIHRDIEVVTDMWGRPRVRLTGAIAEYLADVTIHVSLTHEGDTAAAVAILEAP
3GWM Chain:A ((1-129))
-AIVGVGIDLVSIPDFAEQVDRP-GTVFAETFTPGERRDAADKSSSAARHLAARWAAKEAVIKAWSSSRFSKRPALPEGIHRDIEVVTDMWGRPKVRLSGEIAKHLEDVTIHVSLTHEDQTAAAVAIIEEP
General information:
TITO was launched using:
RESULT:
Template:
3GWM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58847 for 974 contacts (-60.4/contact) +
2D Compatibility (PS) -14285 + (NN) -7666 + (LL) 36
1D Compatibility (HY) -12800 + (ID) 5300
Total energy: -98862.0 ( -101.50 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_3GWM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GWM-query.scw
PDB file :
Tito_Scwrl_3GWM.pdb
: