Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSGNSSLGIIVGIDDSPAAQVAVRWAARDAELRKIPLTLVHAVSPEVATWLEVPLPPGVLRWQQDHGRHLIDDALKVVEQASLRAGPPTVHSEIVPAAAVPTLVDMSKDAVLMVVGCLG-SGRWPGRLLGSVSSGLLRHAHCPVVIIHDEDSVMPHPQQAPVLVGVDGSSASELATAIAFDEASRRNVDLVALHAWSDVDVSEWPGIDWPATQSMAEQVLAERLAGWQERYPNVAITRVVVRDQPARQLVQRSEEAQLVVVGSRGRGGYAGMLVGSVGETVAQLARTPVIVARESLT |
3AB8 Chain:A ((1-268)) | -------MRILLATDGSPQARGAEALAEWLAYKLSAPLTVLFVVDTRLARIPELLPVPVLRTELERALALRGEAVLERVRQSALAAGVA-VEAVLEEGVPHEAILRRARAADLLVLGRSGEAHGDGFGGLGSTADRVLRASPVPVLLAPGE-----PVELEGALLGYDASESAVRALHALAPLARALGLGVRVVSVHED-------PARAEAWALEAEAYLRD---------HGVEASALVLGGDAADHLLRLQGPGDLLALGAPVRR----LVFGSTAERVIRNAQGPVLTAR---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AB8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177657 for 2229 contacts (-79.7/contact) +
2D Compatibility (PS) -29235 + (NN) -16466 + (LL) 1468
1D Compatibility (HY) -7200 + (ID) 3100
Total energy: -232190.0 ( -104.17 by residue)
QMean score : 0.520
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