Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQRGAGQYFAGKRCFVTGAASGIGRATALRLAAQGAELYLTDRDRDGLAQTVCDARALGAQVPEHRVL--DVSDYQDVAAFAADIHA---RHPSMDVVLNIAGVSAWGTVDQLTHDQWSRMVAINLMGPIHVIETLVPPMVAAGRGGHLVNVSSAAGLVGLPWHAAYSASKYGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDRDDPRVNRWVERFSGHAVTPEKAADKILAGVTRNR-YLVYTSADIRALYAFKRYAWWPYTLVMRRVNVFFTRALRPGP |
| 2PD6 Chain:A ((11-251)) | ---------------LVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETV---RLL-----NHAAFQADVSEARAARCLLEQVQACFSRPPS--VVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPM----------KITEMIPM------GHLGDPEDVADVVAFLASEDSGYITGTSVEV--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PD6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127535 for 1833 contacts (-69.6/contact) +
2D Compatibility (PS) -22619 + (NN) -2506 + (LL) 5716
1D Compatibility (HY) -9200 + (ID) 3800
Total energy: -159944.0 ( -87.26 by residue)
QMean score : 0.572
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