Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTWPAPTAPTPVRATVTVPGSKSQTNRALVLAALAAAQGRGASTISGALRSRDTELMLDALQTLGLRVD--GVGSELTVSGR-----IEPGPGARVDCGLAGTVLRFVPPL--AALGSVPVTFDGDQQARGRPIAPLLDALRELGVAVDGTGLP--FRVRGNGSLAGGTVAIDASASSQFVSGLLLSAASFTDGLTVQHTGSSLPSAPHIAMTAAMLRQAGVDIDDSTPNRWQVRPGP--VAARRWDIEPDLTNAVAFLSAAVVSGGTVRITGWPRVSVQPADHILAILRQLNAVVIHADSSLEVRGPTGY-DGFDVDLRA-VGELTPSVAALAALASPGSVSRLSGIAHLRGHETDRLAALSTEINRLGGTCRETPDGLVITATP-LRPGIWRAYADHRMAMAGAIIGLRVAG-VEVDDIAATTKTLPEFPRLWAEMVGPGQGWGYPQPRSGQRARRATGQGSGG |
| 1G6S Chain:A ((1-427)) | MESLTLQP-IARVDGTINLPGSKSVSNRALLLAALA----HGKTVLTNLLDSDDVRHMLNALTALGVSYTLSADRTRCEIIGNGGPLHAEGALEL--FLGNAGTAMRPLAAALCL--GSNDIVLTGEPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGGNVDVDGSVSSQFLTALLMTAPLAPEDTVIRIKGDL-VSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQSYQSPGTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRFADVLEKMGATICWGDDYISCTR--GELNAIDMDMN-HIPDAAMTIATAALFAK--GTTTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFSLVA-LSDTPVTILDPKCTAKTFPDYFEQLARI--------------SQA------A---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G6S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -242934 for 3801 contacts (-63.9/contact) +
2D Compatibility (PS) -44354 + (NN) -21552 + (LL) 556
1D Compatibility (HY) -25200 + (ID) 6350
Total energy: -339834.0 ( -89.41 by residue)
QMean score : 0.514
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