Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAVVKSVALAGRPTTPDRVHEVLGRSMLVDGLDIVLDLTRSGGSYLVDAITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETFA-RVLGDPALPHLFFVEGGALAVENALKAAFDWKS-RHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIAC-FVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIV----AFGKKTQVCGVMAGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEA----EGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLMCAFSL-PTTADR-DELIRQLWQRAVIVLPAGADTVRFRPPLTVSTAEIDAAIAAVRSALPVVT |
| 2PB2 Chain:A ((56-404)) | ----------------------------------------------------GKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWHTSNVFTNEPALRLGRKLIDATFAERVL---------FMNSGTEANETAFKLARHYACVRHS-------PFKTKIIAFHNAFHGRSLFTVSV-GGQPKYSDGFGPKPADIIHVPF---------------NDLHAVKAVMD----DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGGFPVSAMLT---TQEIA-SAF----H-GSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQA-IDEQFDIFS----DIRGMGLLIGAELKPKYKGRARDFLYAGAEAGVMVLNAGADVMRFAPSLVVEEADI--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PB2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173364 for 2866 contacts (-60.5/contact) +
2D Compatibility (PS) -36247 + (NN) -18698 + (LL) 7776
1D Compatibility (HY) -20800 + (ID) 6150
Total energy: -247483.0 ( -86.35 by residue)
QMean score : 0.429
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