Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADPRPDPDELARRAAQVIADRTGIGEHDVAVVLGSGWLPAVAALGSPTTVLPQAELPGFVPPTAAGHAGELLSVPIGAHRVLVLAGRIHAYEGHDLRYVVHPVRAARAAGAQIMVLTNAAGGLRADLQVGQPVLISDHLNL---TARSPL-------VGGEFVDLTDAYSPRLRELARQSDPQ------LAEGVYAGLPGPHYETPAEIRMLQTLGADLVGMSTVHETIAARAAGAEVLGVSLVTN--LAAGITGEPLSHAEVLAAGAASATRMGALLADVIARF |
| 1V48 Chain:A ((26-280)) | ----------------------------QVAVICGSGLGGLVNKLTQAQT-FDYSEIPNFPES------GRLVFGILNGRACVMMQGRFHMYEGYPFWKVTFPVRVFRLLGVETLVVTNAAGGLNPNFEVGDIMLIRDHINLPGFSGENPLRGPNEERFGVRFPAMSDAYDRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVIVARHCGLRVFGFSLITNKVIMDYE----------------AAQKLEQFVSLLMA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159383 for 1761 contacts (-90.5/contact) +
2D Compatibility (PS) -22983 + (NN) -2017 + (LL) 3296
1D Compatibility (HY) -20400 + (ID) 4400
Total energy: -205887.0 ( -116.91 by residue)
QMean score : 0.622
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