Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVARR-G------GD------------VRFAK----------------------TSRMLSDLAG----------------------GHADRSWGQRI----REYTKPLVLILDDFAMREHTAMHADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYRPRKRPGRTTS |
| 4Q4H Chain:A ((280-528)) | --------------MQIMFSLMMIGNILNFI-VRASASAKRVLEVLNEKPAIEEADNAL---ALPNVEGSVSFENVEFRYFENT-DPVLSGVN-FS-VKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDELDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQKQRLSIARALVKKPKVLILDDC-TSSVDPITEKRILDGLKRYTKGCT-TFIITQKI---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q4H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48372 for 1073 contacts (-45.1/contact) +
2D Compatibility (PS) -18879 + (NN) -3036 + (LL) 3220
1D Compatibility (HY) -7200 + (ID) 1350
Total energy: -75617.0 ( -70.47 by residue)
QMean score : 0.308
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