Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDDQPAVPDVDRLARSMLLLHGDHHDHNDSPEQHRTCGSWSKSRDFADDPQRAAAVREASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDSARTRSCPRLTDSIEHAVAEGYLEHHDPNR
4CZX Chain:B ((30-136))
-----LENGRIARLMFKLSVV-------NERGD---------HNWSETGERLLLKLFRDYVFHQVD---ADGKARLD--TNHYLNCLSKLDASSEE-------------QILLTSRDNATVFVVSYRSIRQMLDRAYGELGK-------
General information:
TITO was launched using:
RESULT:
Template:
4CZX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -173 for 623 contacts (-0.3/contact) +
2D Compatibility (PS) -11099 + (NN) -3700 + (LL) 1860
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -15812.0 ( -25.38 by residue)
QMean score : 0.354
(partial model without unconserved sides chains):
PDB file :
Tito_4CZX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CZX-query.scw
PDB file :
Tito_Scwrl_4CZX.pdb
: