Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPSQWLDIAVLAVAFIAAISGWRAGALGSMLSFGGVLLGATAGVLLAPHIVSQISAPRAKLFAALFLILALVVVGEVAGVVLGRAVRGAIRNRPIRLIDSVIGVGVQLVVVLTAAWLLAMPLTQSKEQPELAAAVKGSRVLARVNEAAPTWLKTVPKRLSALLNTSGLPAVLEPFSRTPVIPVASPDPALVNNPVVAATEPSVVKIRSLAPRCQKVLEGTGFVIS--PDRVMTNAHVVAGSNNVTVYAG-DKPFEATVVSYDPSVDVAILAVPHL-PPPPLVFAAE-PAKTGADVVVLGYPGGGNFTATPARIREAIRLSGPDIYGDPEPVTRDVYTIRADVEQGDSGGPLIDLNGQVLGVVFGAAIDDAETGFVLTAGEVAGQLAKIGATQPVGTGACVS |
| 3STI Chain:A ((15-232)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAPMLEKVLPAVVSV-----------LGSGVIINASKGYVLTNNHVI----KISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGL-----NL-EGLENFIQTDASINRGNSGGALLNLNGELIGINTAIL---VGIGFAIPSNMARTLAQQLI------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3STI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115563 for 1443 contacts (-80.1/contact) +
2D Compatibility (PS) -18933 + (NN) -9610 + (LL) 17668
1D Compatibility (HY) -8000 + (ID) 2000
Total energy: -136438.0 ( -94.55 by residue)
QMean score : 0.398
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