Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLKKTLHLSSLSLASLALSSAALAAAPVMLDQGKEWTESHRQDFYSRDQGSQVMPLPWLKALRQPDGTPFLADSLARYGY-LPNPKAPAEGLPVGFTVAGTGARQMVGMTCSACHTRQIEVKGTAYRIDGGPAIVDFQAFLADLDRAVGPLTSDDAAFDAFAKPILGANPPPGARDALLAAVKEWYEPYHTLIERALPKDTWGPARLDAVSMIFNRLTGLDIGTAPPYLIPDNIKAADAPVRYPFLWNAARQNKTQWPGFAANGNDLLGLARNVGEVYGVFATFHPQKSKFHLLGM--DYLKINSANFHGLGKLEDLIKK--IGPPKWPWAVDKHLARKGALIFARKTDEGGCVECHGIRIKDLVLWDTPLRDVGSDSRQHAILDGQVQTGVMEGARMPFGQPLKATDGAFDVLAVAVAGSILQHFVPILGEKHDAKAAAVKPESVMTDETRQLLTAFQKPVRTQADPYPYESRVLQGIWAAAPYLHNGSVPTLEELLKPAAERVESFPVGSAYDVDKVGLAAQQTQFGSYVLKTTGCEQRDSGNSRCGHEYGTSLSAEEKRALLEYLKVL- |
4FDT Chain:A ((21-425)) | ------------------------------------------MQTKIQKYAGTA-MPYPN----RTDGMTPFYINHLGRHGARFPTSRKALDKVEKVLVSAQQEN----GLT-----------------SEGMALLSMIRRLSRLFDGQWGKLS------------KLGETEQEGIAGRMIRNYPQLFSNSAKIEAIA----TYVPRSINSMDAFLSCMIRH--------------------------------------------NPALQVQRSEGKQYNHILRFFDLNKSYVNYKEKGDWLPIYKAFVHKKISPVPIMKKFLLNPEQYLDKEAEEFVMALFSVAAILPDTSI---------------PLNLEDLFTLDEWHRYWQTQNLRQYMSKSSAPVGK----------MLPVAIAWPLLSEFIRSAQEVISGKSDYQANFRFAHAETVIPFVSLMGIEKT--DVQVCRPDSVSVYWK-------------DYEISPMAANVQWLFYRDRDQ--RIWVKILLNEEAAALPISTACFPYYS------WEKTRIFFNQRIEMAKKTLSVFN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FDT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25611 for 3283 contacts (-7.8/contact) +
2D Compatibility (PS) -40489 + (NN) -11693 + (LL) 10980
1D Compatibility (HY) -14000 + (ID) 3550
Total energy: -84363.0 ( -25.70 by residue)
QMean score : 0.146
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