Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRWEELSEQPCSLARVLAILGDRWTLLVLRDCFLGVRRFDDFERSLGVTRHVLADRLKRLVEAEILAKVPYQ-ERP--LREEYRLTEKGMELYPAILSLVNWGDRHLAGVEGPPLEHVHKHCGQHMHGVLVCSECGEPLHARDVTVREGLFWKGRLLRRG
2HGC Chain:A ((5-82))
----------------------KLRYAILKEIFEGNTPLS--ENDIGVTEDQFDDAVNFLKREGYIIGVHYSDDRPHLYKLGPELTEKGENYLKENGTWSKA----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2HGC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48407 for 492 contacts (-98.4/contact) +
2D Compatibility (PS) -7589 + (NN) 1791 + (LL) 4968
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -54137.0 ( -110.03 by residue)
QMean score : 0.451
(partial model without unconserved sides chains):
PDB file :
Tito_2HGC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HGC-query.scw
PDB file :
Tito_Scwrl_2HGC.pdb
: