Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKRPNFLVIVADDLGFSDIGAFGG-EIATPNLDALAIAG--LRLTDFHTA-STCSPTRSMLL--TGTDHHIAGIGTMAEALTPELEGKPGYEGHLNERVVALPELLREAGYQTLMAGKWHLGLKPE-QTPHARGFERSFSLLPGAANHYGFEPPYDESTPRILKGTPALYVEDERYLDTLPEGFYSSDAFGDKLLQYLKERDQSRPFFAYLPFSAPHWPLQAPREIVEKYRGRYDAGPEALRQERLARLKELGLVEADVEAHPVLALTREWEALEDEERAKSARAMEVYAAMVERMDWNIGRVVDYLRRQGELDNTFVLFMSDNGAEGALLEAFPKFGPDLLGFLDRHYDNSLENIGRANSYVWYGPRWAQAATAPSRLYKAFTTQ--GGIRVPALVRYPRLSRQGAISHAFATVMDVTPTLLDLAGVRHPGKRWRGREIAEPRGRSWLGWLSGETEAAHDENTVTGWELFGMRAIRQGDWKAVYLPAPVGPATWQLYDLARDPGEIHDLADSQPGKLAELIEHWKRYVSETGVVEGASPFLVR |
| 2W8D Chain:A ((29-338)) | -AEGKNVIYVSLESLQSFIIDYKIDGKEVTPFLNKLAHDNETFYFDNFFHQTGQGKTSDAEFMMENSLYPLAQGSVFVNK---------------AQNTLQSVPAILKSKNYTSATFHGNTQTFWNRNEMYKAEGIDKFFDSAY-----YDMNE---E---------------------NTKNYGMKDKPFFKESMPLLES--LPQPFYTKFITLSNHFPFGMDEGDTD-F----PA---------------------------------------G---DFGDSVVDNYFQSAHYLDQSIEQFFNDLKKDGLYDKSIIVMYGDHYGI---------SENHNKAMA--------KVLGK---------------------DEITDYDNAQLQRVPLFIHAAGVK--GEKVHKYAGDVDVAPTILHLLGVDTKD--------YLMSGSDILSKEHREVIPFRNGDFISPKYTKISGKYYDTKTGKELDESEVDKSEDSLVKKELEMSDKIINGDLLRFYEPKGFKKVNPSDYDYTKH--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117981 for 2553 contacts (-46.2/contact) +
2D Compatibility (PS) -31501 + (NN) -10116 + (LL) 9548
1D Compatibility (HY) -9200 + (ID) 2450
Total energy: -161700.0 ( -63.34 by residue)
QMean score : 0.502
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