Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTCAYRREIHHAHVAIRDWLA-GDSRADALDALMARFAEDFSMVTPHGVVLDKTALGELF-RSK-GGTRPGLRIEIDGESLLASGVDGATLAYREIQSDAAGRSER-L-STVVLHRDDEGRLYWRHLQETFCG
3BB9 Chain:A ((24-148))
AFIGVDSAAGNVVKQFHAALQMGN-----EAIVRQSLAANVQIYEGGKVERSLTEYANHHMLADMA-YLKGLTITPKEHQITITG-DIAISTSISHAQGEYKSIDSMTMETLVLIKQADGRWKITHVHWS---
General information:
TITO was launched using:
RESULT:
Template:
3BB9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37524 for 810 contacts (-46.3/contact) +
2D Compatibility (PS) -12735 + (NN) -5956 + (LL) 320
1D Compatibility (HY) -1200 + (ID) 850
Total energy: -57945.0 ( -71.54 by residue)
QMean score : 0.318
(partial model without unconserved sides chains):
PDB file :
Tito_3BB9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BB9-query.scw
PDB file :
Tito_Scwrl_3BB9.pdb
: