Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKVVLYKRLSAPLMERLRERVEVLLVEEPGRDGLARLRDA------LPEAHGLLGASLRLDAGLLDLAPRLEAIASVSVGVDNYDIDYLDRRGILLSNTPDVLTETTADTGFALILATARRVVELAGWVRAGE---WKKSVGAAQFGTDVHGKTLGIVGMGRIGEALARRGHHGFGMRVLYH-SHSPKPHVEERYAASYRPLDALLEESDFVCLTLPLTAATEGLIGAAQFARMRPQAIFINISRGRVVDEAALIEALAQRRIRAAGLDVFERE-------PLSPDSPLLRLPNVVATPHIGSATEETREAMARCAVDNLLAALAGARPLNLVNPSAWARRRGA |
| 4NU6 Chain:B ((17-326)) | --------QLLAPHCELITNQTDSTLTRE---EILRRCRDAQAMMAFMPD---------RVDADFLQACPELRVIGCALKGFDNFDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRF----YGTGLDNATVGFLGMGAIGLAMADR-LQGWGATLQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGSAVRAVKLEIERCAAQNILQALAGERPINAVN---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NU6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155923 for 2248 contacts (-69.4/contact) +
2D Compatibility (PS) -32053 + (NN) -14795 + (LL) 1940
1D Compatibility (HY) -21200 + (ID) 5800
Total energy: -227831.0 ( -101.35 by residue)
QMean score : 0.455
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