Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNMPSILSLAVAGLLVAPVHAATAPSEPFQPPAESSLPDNAFGEMVRQGQALFVETRKNAPHLVGNQLNCVNCHLDQGRRA---------------NSAP-QWAAYPVYPAFRAKNNKVNTFAERLQGCFQF--SM--------------NGKVP---------AAD-SPEIKALTVYAYWLASQ-APTGVSLPGRGYPDVAPPEGGYSIERGAKVYA-AQCAICHGADGQGQMA---LG-------------------------QTVFPPLWGAQ---SFNWGAGMHRINTAASFIKYNMPLGKPGTLSDRDAWDVAAFMNSHERPQDPRLVDGSVEKTRQKFHANDGVNLYGQKVNGVLLGQGI |
| 1IQC Chain:A ((15-288)) | -----------------------------------------NADMAELGKMLFFDPR-L---SKSGFISCNSCHNLSMGGTDNITTSIGHKWQQGPINAPTVLNSSMNLA-QFW-DGRAKDLKEQAAGPIANPKEMASTHEIAEKVVASMPQYRERFKKVFGSDEVTIDRITTAIAQFEETLVTPGSKFDKWLEG------DKNALNQDELEGYNLFKGSGCVQCHNGPAVGGSSYQKMGVFKPYETKNPAAGRMDVTGNEADRNVFKVPTLRNIELTYPYFHDGGAATLEQAVETMGRIQLN---REFNKDEVSKIVAFLKTLTGDQPD------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1IQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -49310 for 1454 contacts (-33.9/contact) +
2D Compatibility (PS) -20466 + (NN) -6301 + (LL) 4060
1D Compatibility (HY) 800 + (ID) 1500
Total energy: -72717.0 ( -50.01 by residue)
QMean score : 0.190
|
|
|