Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MCPCPHSQAQGETDGEAEWHNAALDFTHAMSYGDYLKLDKVLDAQFPLSPD-----HNEMLFIIQHQTSELWMKLMLHELRAAREH-----VKSGKLGPALKMLARVSRIFDQLVHAWAVLATMTPTEYNTIRPYLGQSSGFQSYQYREIEFILG-------------------NKNATLLKPHAHRAELLAALEQALHTP-----------SLYDEAIRLMAAQGLPVS-----QERLARDAAAGTCYEASVEAA--------------------------WRQVYQAPERYWDLYQLAEKLIDLEDSFRQWRFRHVTTVERIIGFKP-GTGGTEGVGYLRSMLDTI--LFPELWRLRSNL----------- |
| 4HKA Chain:A ((3-347)) | ----------------------------GKIYGEYLMLDKLLDAQCMLSEEDKRPVHDEHLFIITHQAYELWFKQIIFEFDSIRDMLDAEVIDETKTLEIVKRLNRVVLILKLLVDQVPILETMTPLDFMDFRKYLAPASGFQSLQFRLIENKLGVLTEQRVRYNQKYSDVFSDEEARNSIRNSEKDPSLLELVQRWLERTPGLEESGFNFWAKFQESVDRFLEAQVQSAMEEPVEKAKNYRLMDIEKRREVYRSIFDPAVHDALVRRGDRRFSHRALQGAIMITFYRDEPRFSQPHQLLTLLMDIDSLITKWRYNHVIMVQRMIGSQQLGTGGSSGYQYLRSTLSDRYKVFLDLFNLSTFLIPREAIPPLDE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HKA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89031 for 1615 contacts (-55.1/contact) +
2D Compatibility (PS) -28608 + (NN) -20732 + (LL) 1264
1D Compatibility (HY) -21600 + (ID) 4300
Total energy: -163007.0 ( -100.93 by residue)
QMean score : 0.380
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