Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRIFADNAQSIGNTPLVQINRIA-PRGVTILAKIEGRNPGYSVKCRIGANMIWDAEASGRLK--SGMTLVEPTSGNTGIGLAFVAAARGYKLILTMPASMSLERRKVLKALGAELVLTEPAKGMKGAIQKA----EELVAGDPGKYFMPQQFDNPANPAIHEKTTGPEIWNDTEGAVDVLVSGVGTGGTLTGVSRYIKNTRGKPILAVAVEPVTSPVISQTLAGEEVKPAPHKIQGIGAGFVPKNLDLSLVDRVEKIGDDEAKNMALRLMQEEGILCGISSGAAMAAAVRLAEEPNMQGKTIVVILPDSGERYLSSMLFDGLFSEQELTQ |
| 2EFY Chain:B ((6-301)) | ----------AIGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSGQVIVEPTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLAAREEALRLKEELGA------FMPDQFKNPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTITGVGRYLKE-RIPHVKVIAVEPARSNVLSGGKMGQ------HGFQGMGPGFIPENLDLSLLDGVIQVWEEDAFPLARRLAREEGLFLGMSSGGIVWAALQVARELG-PGKRVACISPDGGWKYLSTPLY----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EFY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124467 for 2671 contacts (-46.6/contact) +
2D Compatibility (PS) -32359 + (NN) -13266 + (LL) 1656
1D Compatibility (HY) -22000 + (ID) 7600
Total energy: -198036.0 ( -74.14 by residue)
QMean score : 0.532
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